Protein ZmABI2
ZmABI2 is a protein in the ABI3-VP1 family.
Information
TF Name: ZmABI2
Species: Maize
TF Family: ABI3-VP1
Gene Name(Synonym): ABI2
Uniprot ID: K7U5N4
Subgenome: 2

Protein ZmABI2

ZmABI2 is a protein in the ABI3-VP1 family.

Overview of domains present in v5 transcripts
PF02362
Zm00001eb427970_T003
Zm00001eb427970_T001
Zm00001eb427970_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d026005DAPseq no logo sequence fimo position
Zm00001d026005DAPseq no logo sequence fimo position
Zm00001d026005ChIPseq no logo sequence fimo position
Zm00001d026005PChIPseq no logo sequence fimo position

Interactions where ZmABI2 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmABI2 is the target  
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There are 75 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb427970_T003 from maize genome v5

Amino Acid Sequence
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MEFASSSSRFSKEEEEQEEEEDEEVSPREIPFMTAAATAGTGATSSSPSPSAAASASASSSAAALRSSGGGGGGDDDMEV
VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRAGKLWRFRYSYWNSSQSYVMTKGWSRFVK
EKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHRMLPRLPLHMPPLASPYGYGPWGGGAGGFFVPPATLYEHH
RFRQALDFRNVSAAAAPARQLLFFGSAGMPPRASIPQQQQPPPPSLHSIMMVQPSPEATAGLPMLLDSVPLVNSPTAAAK
RVRLFGVNLDNPQPGSSAESSHDTNALSLRMPGWQRPGPLRFFESTPQRGAAGAAAGAESSAASSPSSPSSSKREAHSSV
DLDL

MEFASSSSRFSKEEEEQEEEEDEEVSPREIPFMTAAATAGTGATSSSPSPSAAASASASSSAAALRSSGGGGGGDDDMEV
VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRAGKLWRFRYSYWNSSQSYVMTKGWSRFVK
EKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHRMLPRLPLHMPPLASPYGYGPWGGGAGGFFVPPATLYEHH
RFRQALDFRNVSAAAAPARQLLFFGSAGMPPRASIPQQQQPPPPSLHSIMMVQPSPEATAGLPMLLDSVPLVNSPTAAAK
RVRLFGVNLDNPQPGSSAESSHDTNALSLRMPGWQRPGPLRFFESTPQRGAAGAAAGAESSAASSPSSPSSSKREAHSSV
DLDL

MEFASSSSRFSKEEEEQEEEEDEEVSPREIPFMTAAATAGTGATSSSPSPSAAASASASSSAAALRSSGGGGGGDDDMEV
VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRAGKLWRFRYSYWNSSQSYVMTKGWSRFVK
EKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHRMLPRLPLHMPPLASPYGYGPWGGGAGGFFVPPATLYEHH
RFRQALDFRNVSAAAAPARQLLFFGSAGMPPRASIPQQQQPPPPSLHSIMMVQPSPEATAGLPMLLDSVPLVNSPTAAAK
RVRLFGVNLDNPQPGSSAESSHDTNALSLRMPGWQRPGPLRFFESTPQRGAAGAAAGAESSAASSPSSPSSSKREAHSSV
DLDL

MEFASSSSRFSKEEEEQEEEEDEEVSPREIPFMTAAATAGTGATSSSPSPSAAASASASSSAAALRSSGGGGGGDDDMEV
VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRAGKLWRFRYSYWNSSQSYVMTKGWSRFVK
EKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHRMLPRLPLHMPPLASPYGYGPWGGGAGGFFVPPATLYEHH
RFRQALDFRNVSAAAAPARQLLFFGSAGMPPRASIPQQQQPPPPSLHSIMMVQPSPEATAGLPMLLDSVPLVNSPTAAAK
RVRLFGVNLDNPQPGSSAESSHDTNALSLRMPGWQRPGPLRFFESTPQRGAAGAAAGAESSAASSPSSPSSSKREAHSSV
DLDL

MEFASSSSRFSKEEEEQEEEEDEEVSPREIPFMTAAATAGTGATSSSPSPSAAASASASSSAAALRSSGGGGGGDDDMEV
VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRAGKLWRFRYSYWNSSQSYVMTKGWSRFVK
EKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHRMLPRLPLHMPPLASPYGYGPWGGGAGGFFVPPATLYEHH
RFRQALDFRNVSAAAAPARQLLFFGSAGMPPRASIPQQQQPPPPSLHSIMMVQPSPEATAGLPMLLDSVPLVNSPTAAAK
RVRLFGVNLDNPQPGSSAESSHDTNALSLRMPGWQRPGPLRFFESTPQRGAAGAAAGAESSAASSPSSPSSSKREAHSSV
DLDL

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF02362
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Nucleotide Sequence
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CTCATCACATCGATCCCGTCCGCCC...

GRMZM2G018485_T01 from maize genome v3


Related TFome: pUT3663

Amino Acid Sequence
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MEFASSSSRFSKEEEEQEEEEDEEVSPREIPFMTAAATAGTGATSSSPSPSAAASASASSSAAALRSSGGGGGGDDDMEV
VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRAGKLWRFRYSYWNSSQSYVMTKGWSRFVK
EKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHRMLPRLPLHMPPLASPYGYGPWGGGAGGFFVPPATLYEHH
RFRQALDFRNVSAAAAPARQLLFFGSAGMPPRASIPQQQQPPPPSLHSIMMVQPSPEATAGLPMLLDSVPLVNSPTAAAK
RVRLFGVNLDNPQPGSSAESSHDTNALSLRMPGWQRPGPLRFFESTPQRGAAGAAAGAESSAASSPSSPSSSKREAHSSV
DLDL

Nucleotide Sequence
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CTCATCACATCGATCCCGTCCGCCC...

Zm00001d026005_T001 from maize genome v4

Amino Acid Sequence
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MEFASSSSRFSKEEEEQEEEEDEEVSPREIPFMTAAATAGTGATSSSPSPSAAASASASSSAAALRSSGGGGGGDDDMEV
VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRAGKLWRFRYSYWNSSQSYVMTKGWSRFVK
EKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHRMLPRLPLHMPPLASPYGYGPWGGGAGGFFVPPATLYEHH
RFRQALDFRNVSAAAAPARQLLFFGSAGMPPRASIPQQQQPPPPSLHSIMMVQPSPEATAGLPMLLDSVPLVNSPTAAAK
RVRLFGVNLDNPQPGSSAESSHDTNALSLRMPGWQRPGPLRFFESTPQRGAAGAAAGAESSAASSPSSPSSSKREAHSSV
DLDL

Nucleotide Sequence
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ATGGAGTTCGCGAGCTCTTCGAGTA...

Zm00001eb427970_T001 from maize genome v5

Amino Acid Sequence
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MEFASSSSRFSKEEEEQEEEEDEEVSPREIPFMTAAATAGTGATSSSPSPSAAASASASSSAAALRSSGGGGGGDDDMEV
VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRAGKLWRFRYSYWNSSQSYVMTKGWSRFVK
EKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHRMLPRLPLHMPPLASPYGYGPWGGGAGGFFVPPATLYEHH
RFRQALDFRNVSAAAAPARQLLFFGSAGMPPRASIPQQQQPPPPSLHSIMMVQPSPEATAGLPMLLDSVPLVNSPTAAAK
RVRLFGVNLDNPQPGSSAESSHDTNALSLRMPGWQRPGPLRFFESTPQRGAAGAAAGAESSAASSPSSPSSSKREAHSSV
DLDL

Nucleotide Sequence
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GTCACTCATCACATCGATCCCGTCC...

Zm00001eb427970_T002 from maize genome v5

Amino Acid Sequence
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MEFASSSSRFSKEEEEQEEEEDEEVSPREIPFMTAAATAGTGATSSSPSPSAAASASASSSAAALRSSGGGGGGDDDMEV
VEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDAAANEKGLLLSFEDRAGKLWRFRYSYWNSSQSYVMTKGWSRFVK
EKRLDAGDTVSFCRGAADAARDRLFIDWRKRSADSSRHPHRMLPRLPLHMPPLASPYGYGPWGGGAGGFFVPPATLYEHH
RFRQALDFRNVSAAAAPARQLLFFGSAGMPPRASIPQQQQPPPPSLHSIMMVQPSPEATAGLPMLLDSVPLVNSPTAAAK
RVRLFGVNLDNPQPGSSAESSHDTNALSLRMPGWQRPGPLRFFESTPQRGAAGAAAGAESSAASSPSSPSSSKREAHSSV
DLDL

Nucleotide Sequence
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CTCATCACATCGATCCCGTCCGCCC...


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